Having the same issue since yesterday, and I'm pretty sure they're shaving downloads......
They say there's nothing wrong with stats, and told me I had hundreds of files deleted... and I didn't, because I checked all my folders....^o)^o)^o)
Something very strange is going on with their counts of downloads and earnings...
Every filehost shaves downloads, rapidgator is still better than some of them, and I do confirm their counter not working sometimes.